Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 YBX2P1-201ENST00000394192 760 ntBASIC14.87□□□□□ -0.03
FOXG1P55316 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXG1P55316 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXG1P55316 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
FOXG1P55316 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
FOXG1P55316 AC092865.5-201ENST00000545435 363 ntBASIC14.87□□□□□ -0.03
FOXG1P55316 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXG1P55316 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.87□□□□□ -0.03
FOXG1P55316 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
FOXG1P55316 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
FOXG1P55316 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.87□□□□□ -0.03
FOXG1P55316 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FOXG1P55316 TOP3BP1-201ENST00000420768 1380 ntBASIC14.86□□□□□ -0.03
FOXG1P55316 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
FOXG1P55316 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
FOXG1P55316 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
FOXG1P55316 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 KRT8P49-201ENST00000604166 1432 ntBASIC14.86□□□□□ -0.03
FOXG1P55316 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 AC092919.2-201ENST00000623631 1645 ntBASIC14.86□□□□□ -0.03
FOXG1P55316 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
FOXG1P55316 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.86□□□□□ -0.03
FOXG1P55316 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
FOXG1P55316 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.86□□□□□ -0.03
FOXG1P55316 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.86□□□□□ -0.03
FOXG1P55316 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.86□□□□□ -0.03
FOXG1P55316 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.86□□□□□ -0.03
FOXG1P55316 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.86□□□□□ -0.03
FOXG1P55316 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
FOXG1P55316 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
FOXG1P55316 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.86□□□□□ -0.03
FOXG1P55316 AC023141.13-201ENST00000604991 943 ntBASIC14.86□□□□□ -0.03
FOXG1P55316 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.86□□□□□ -0.03
FOXG1P55316 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
FOXG1P55316 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.86□□□□□ -0.03
FOXG1P55316 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
FOXG1P55316 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FOXG1P55316 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
FOXG1P55316 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
FOXG1P55316 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
FOXG1P55316 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 BX842568.4-201ENST00000421222 227 ntBASIC14.85□□□□□ -0.03
FOXG1P55316 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.85□□□□□ -0.03
FOXG1P55316 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
FOXG1P55316 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.85□□□□□ -0.03
FOXG1P55316 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.85□□□□□ -0.03
FOXG1P55316 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.85□□□□□ -0.03
FOXG1P55316 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.85□□□□□ -0.03
FOXG1P55316 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.85□□□□□ -0.03
FOXG1P55316 AC002347.1-201ENST00000569543 541 ntBASIC14.85□□□□□ -0.03
FOXG1P55316 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.85□□□□□ -0.03
FOXG1P55316 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 AC010327.4-202ENST00000591484 748 ntBASIC14.85□□□□□ -0.03
FOXG1P55316 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.85□□□□□ -0.03
FOXG1P55316 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.85□□□□□ -0.03
FOXG1P55316 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
FOXG1P55316 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
FOXG1P55316 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FOXG1P55316 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms