Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
CLTCL1P53675 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
CLTCL1P53675 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC23.99■■□□□ 1.43
CLTCL1P53675 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC23.99■■□□□ 1.43
CLTCL1P53675 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLTCL1P53675 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLTCL1P53675 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLTCL1P53675 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC23.99■■□□□ 1.43
CLTCL1P53675 QPRT-203ENST00000562473 579 ntTSL 3 BASIC23.99■■□□□ 1.43
CLTCL1P53675 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC23.99■■□□□ 1.43
CLTCL1P53675 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC23.99■■□□□ 1.43
CLTCL1P53675 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLTCL1P53675 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CLTCL1P53675 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC23.98■■□□□ 1.43
CLTCL1P53675 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CLTCL1P53675 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC23.98■■□□□ 1.43
CLTCL1P53675 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLTCL1P53675 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLTCL1P53675 AC092068.3-201ENST00000587894 2016 ntBASIC23.98■■□□□ 1.43
CLTCL1P53675 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CLTCL1P53675 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLTCL1P53675 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CLTCL1P53675 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLTCL1P53675 HNRNPA3P1-201ENST00000401429 1139 ntBASIC23.98■■□□□ 1.43
CLTCL1P53675 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC23.98■■□□□ 1.43
CLTCL1P53675 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC23.98■■□□□ 1.43
CLTCL1P53675 HNRNPA3P5-201ENST00000455201 833 ntBASIC23.98■■□□□ 1.43
CLTCL1P53675 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC23.98■■□□□ 1.43
CLTCL1P53675 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC23.98■■□□□ 1.43
CLTCL1P53675 AC008738.7-201ENST00000609744 511 ntBASIC23.98■■□□□ 1.43
CLTCL1P53675 AC003101.2-201ENST00000612557 442 ntBASIC23.98■■□□□ 1.43
CLTCL1P53675 GPER1-207ENST00000619052 571 ntTSL 2 BASIC23.98■■□□□ 1.43
CLTCL1P53675 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC23.98■■□□□ 1.43
CLTCL1P53675 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLTCL1P53675 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLTCL1P53675 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLTCL1P53675 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLTCL1P53675 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLTCL1P53675 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CLTCL1P53675 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
CLTCL1P53675 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC23.97■■□□□ 1.43
CLTCL1P53675 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
CLTCL1P53675 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLTCL1P53675 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLTCL1P53675 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC23.97■■□□□ 1.43
CLTCL1P53675 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLTCL1P53675 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC23.97■■□□□ 1.43
CLTCL1P53675 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CLTCL1P53675 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLTCL1P53675 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CLTCL1P53675 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC23.97■■□□□ 1.43
CLTCL1P53675 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CLTCL1P53675 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CLTCL1P53675 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
CLTCL1P53675 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CLTCL1P53675 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLTCL1P53675 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLTCL1P53675 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC23.97■■□□□ 1.43
CLTCL1P53675 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CLTCL1P53675 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC23.96■■□□□ 1.43
CLTCL1P53675 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 AC005034.1-201ENST00000426657 489 ntBASIC23.96■■□□□ 1.43
CLTCL1P53675 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 HLA-V-204ENST00000476601 1289 ntBASIC23.96■■□□□ 1.43
CLTCL1P53675 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC23.96■■□□□ 1.43
CLTCL1P53675 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CLTCL1P53675 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC23.96■■□□□ 1.43
CLTCL1P53675 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC23.96■■□□□ 1.43
CLTCL1P53675 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLTCL1P53675 PCDHB17P-201ENST00000539533 2393 ntBASIC23.95■■□□□ 1.43
CLTCL1P53675 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC23.95■■□□□ 1.43
CLTCL1P53675 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CLTCL1P53675 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC23.95■■□□□ 1.43
CLTCL1P53675 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.43
CLTCL1P53675 SPTLC1P1-201ENST00000447199 261 ntBASIC23.95■■□□□ 1.43
CLTCL1P53675 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC23.95■■□□□ 1.43
CLTCL1P53675 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC23.95■■□□□ 1.43
CLTCL1P53675 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC23.95■■□□□ 1.43
CLTCL1P53675 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
CLTCL1P53675 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC23.95■■□□□ 1.42
CLTCL1P53675 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CLTCL1P53675 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLTCL1P53675 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CLTCL1P53675 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC23.95■■□□□ 1.42
CLTCL1P53675 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLTCL1P53675 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CLTCL1P53675 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CLTCL1P53675 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLTCL1P53675 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CLTCL1P53675 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CLTCL1P53675 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms