Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.8■□□□□ 0.44
CLCN4P51793 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN4P51793 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCN4P51793 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.8■□□□□ 0.44
CLCN4P51793 ALG1L8P-201ENST00000533887 760 ntBASIC17.8■□□□□ 0.44
CLCN4P51793 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN4P51793 MIR3909-201ENST00000579518 119 ntBASIC17.8■□□□□ 0.44
CLCN4P51793 AL031055.1-201ENST00000606362 631 ntBASIC17.8■□□□□ 0.44
CLCN4P51793 AL390754.1-201ENST00000619088 582 ntBASIC17.8■□□□□ 0.44
CLCN4P51793 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLCN4P51793 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
CLCN4P51793 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLCN4P51793 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN4P51793 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.8■□□□□ 0.44
CLCN4P51793 LETM1P2-201ENST00000597330 2178 ntBASIC17.8■□□□□ 0.44
CLCN4P51793 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.8■□□□□ 0.44
CLCN4P51793 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN4P51793 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN4P51793 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCN4P51793 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
CLCN4P51793 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 TOP3BP1-201ENST00000420768 1380 ntBASIC17.79■□□□□ 0.44
CLCN4P51793 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.79■□□□□ 0.44
CLCN4P51793 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CLCN4P51793 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CLCN4P51793 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCN4P51793 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
CLCN4P51793 MIR346-201ENST00000362234 95 ntBASIC17.79■□□□□ 0.44
CLCN4P51793 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CLCN4P51793 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.79■□□□□ 0.44
CLCN4P51793 AC244107.1-201ENST00000442033 332 ntBASIC17.79■□□□□ 0.44
CLCN4P51793 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLCN4P51793 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCN4P51793 IGHV3-42-201ENST00000520410 361 ntBASIC17.79■□□□□ 0.44
CLCN4P51793 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.79■□□□□ 0.44
CLCN4P51793 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN4P51793 AP000842.3-202ENST00000569238 1080 ntBASIC17.79■□□□□ 0.44
CLCN4P51793 AC091167.2-201ENST00000579581 588 ntBASIC17.79■□□□□ 0.44
CLCN4P51793 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.79■□□□□ 0.44
CLCN4P51793 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN4P51793 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN4P51793 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN4P51793 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN4P51793 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLCN4P51793 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.79■□□□□ 0.44
CLCN4P51793 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.79■□□□□ 0.44
CLCN4P51793 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
CLCN4P51793 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLCN4P51793 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLCN4P51793 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CLCN4P51793 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLCN4P51793 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLCN4P51793 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLCN4P51793 FAM207CP-201ENST00000443486 507 ntBASIC17.78■□□□□ 0.44
CLCN4P51793 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.78■□□□□ 0.44
CLCN4P51793 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN4P51793 AC097493.3-201ENST00000509725 367 ntBASIC17.78■□□□□ 0.44
CLCN4P51793 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.78■□□□□ 0.44
CLCN4P51793 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.78■□□□□ 0.44
CLCN4P51793 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.78■□□□□ 0.44
CLCN4P51793 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLCN4P51793 AC027307.2-201ENST00000591252 911 ntBASIC17.78■□□□□ 0.44
CLCN4P51793 MIR6080-201ENST00000617359 66 ntBASIC17.78■□□□□ 0.44
CLCN4P51793 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CLCN4P51793 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.78■□□□□ 0.44
CLCN4P51793 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLCN4P51793 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms