Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC6A12P48065 MIR4492-201ENST00000581627 80 ntBASIC16.38■□□□□ 0.21
SLC6A12P48065 MIR1199-201ENST00000621445 119 ntBASIC16.38■□□□□ 0.21
SLC6A12P48065 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC6A12P48065 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SLC6A12P48065 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC6A12P48065 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC6A12P48065 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC6A12P48065 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC6A12P48065 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC6A12P48065 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC6A12P48065 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC6A12P48065 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC6A12P48065 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A12P48065 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SLC6A12P48065 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A12P48065 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A12P48065 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SLC6A12P48065 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A12P48065 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A12P48065 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SLC6A12P48065 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SLC6A12P48065 SNX33P1-201ENST00000592116 1762 ntBASIC16.37■□□□□ 0.21
SLC6A12P48065 RPS2P28-201ENST00000314255 741 ntBASIC16.37■□□□□ 0.21
SLC6A12P48065 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A12P48065 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC6A12P48065 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SLC6A12P48065 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SLC6A12P48065 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
SLC6A12P48065 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A12P48065 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.37■□□□□ 0.21
SLC6A12P48065 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A12P48065 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A12P48065 AL160237.2-201ENST00000556165 472 ntBASIC16.37■□□□□ 0.21
SLC6A12P48065 AC091167.2-201ENST00000579581 588 ntBASIC16.37■□□□□ 0.21
SLC6A12P48065 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A12P48065 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.37■□□□□ 0.21
SLC6A12P48065 PGM5P2-202ENST00000637225 1043 ntBASIC16.37■□□□□ 0.21
SLC6A12P48065 AC006538.1-201ENST00000567905 1585 ntBASIC16.37■□□□□ 0.21
SLC6A12P48065 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A12P48065 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC6A12P48065 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
SLC6A12P48065 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
SLC6A12P48065 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A12P48065 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A12P48065 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A12P48065 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A12P48065 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A12P48065 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
SLC6A12P48065 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A12P48065 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC6A12P48065 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SLC6A12P48065 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SLC6A12P48065 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A12P48065 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A12P48065 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC6A12P48065 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A12P48065 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SLC6A12P48065 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC6A12P48065 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A12P48065 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A12P48065 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SLC6A12P48065 MIR7706-201ENST00000613747 67 ntBASIC16.36■□□□□ 0.21
SLC6A12P48065 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A12P48065 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A12P48065 UBALD1-205ENST00000590891 2641 ntBASIC16.36■□□□□ 0.21
SLC6A12P48065 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A12P48065 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A12P48065 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC6A12P48065 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A12P48065 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A12P48065 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A12P48065 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A12P48065 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SLC6A12P48065 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SLC6A12P48065 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SLC6A12P48065 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SLC6A12P48065 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SLC6A12P48065 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC6A12P48065 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC6A12P48065 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SLC6A12P48065 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC6A12P48065 RNA5SP419-201ENST00000515908 135 ntBASIC16.35■□□□□ 0.21
SLC6A12P48065 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SLC6A12P48065 AL773604.1-201ENST00000617417 272 ntBASIC16.35■□□□□ 0.21
SLC6A12P48065 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC6A12P48065 AC005593.1-201ENST00000624894 515 ntBASIC16.35■□□□□ 0.21
SLC6A12P48065 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A12P48065 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC6A12P48065 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms