Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GRIA4P48058 AC097637.2-201ENST00000624096 1997 ntBASIC17.42■□□□□ 0.38
GRIA4P48058 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GRIA4P48058 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GRIA4P48058 AC116353.5-201ENST00000638148 1699 ntBASIC17.42■□□□□ 0.38
GRIA4P48058 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GRIA4P48058 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
GRIA4P48058 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.42■□□□□ 0.38
GRIA4P48058 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.42■□□□□ 0.38
GRIA4P48058 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.42■□□□□ 0.38
GRIA4P48058 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
GRIA4P48058 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.42■□□□□ 0.38
GRIA4P48058 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GRIA4P48058 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.42■□□□□ 0.38
GRIA4P48058 AC023274.1-201ENST00000418278 595 ntBASIC17.42■□□□□ 0.38
GRIA4P48058 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.42■□□□□ 0.38
GRIA4P48058 RPS8P6-201ENST00000426177 609 ntBASIC17.42■□□□□ 0.38
GRIA4P48058 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.42■□□□□ 0.38
GRIA4P48058 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
GRIA4P48058 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.42■□□□□ 0.38
GRIA4P48058 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.42■□□□□ 0.38
GRIA4P48058 AC134684.3-201ENST00000641758 218 ntBASIC17.42■□□□□ 0.38
GRIA4P48058 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GRIA4P48058 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.42■□□□□ 0.38
GRIA4P48058 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.42■□□□□ 0.38
GRIA4P48058 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GRIA4P48058 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
GRIA4P48058 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GRIA4P48058 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
GRIA4P48058 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.41■□□□□ 0.38
GRIA4P48058 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.41■□□□□ 0.38
GRIA4P48058 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.41■□□□□ 0.38
GRIA4P48058 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.41■□□□□ 0.38
GRIA4P48058 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GRIA4P48058 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.41■□□□□ 0.38
GRIA4P48058 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.41■□□□□ 0.38
GRIA4P48058 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.41■□□□□ 0.38
GRIA4P48058 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.41■□□□□ 0.38
GRIA4P48058 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.41■□□□□ 0.38
GRIA4P48058 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.41■□□□□ 0.38
GRIA4P48058 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.41■□□□□ 0.38
GRIA4P48058 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.41■□□□□ 0.38
GRIA4P48058 AC004706.3-202ENST00000621574 984 ntBASIC17.41■□□□□ 0.38
GRIA4P48058 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
GRIA4P48058 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.41■□□□□ 0.38
GRIA4P48058 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GRIA4P48058 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GRIA4P48058 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GRIA4P48058 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.4■□□□□ 0.38
GRIA4P48058 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GRIA4P48058 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
GRIA4P48058 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GRIA4P48058 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GRIA4P48058 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GRIA4P48058 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.4■□□□□ 0.38
GRIA4P48058 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.4■□□□□ 0.38
GRIA4P48058 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
GRIA4P48058 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GRIA4P48058 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GRIA4P48058 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.4■□□□□ 0.38
GRIA4P48058 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GRIA4P48058 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.4■□□□□ 0.38
GRIA4P48058 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.4■□□□□ 0.38
GRIA4P48058 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GRIA4P48058 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.4■□□□□ 0.38
GRIA4P48058 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GRIA4P48058 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.4■□□□□ 0.38
GRIA4P48058 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms