Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC25.1■■□□□ 1.61
KDM5CP41229 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
KDM5CP41229 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC25.1■■□□□ 1.61
KDM5CP41229 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
KDM5CP41229 KRT8P49-201ENST00000604166 1432 ntBASIC25.1■■□□□ 1.61
KDM5CP41229 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
KDM5CP41229 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
KDM5CP41229 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC25.1■■□□□ 1.61
KDM5CP41229 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC25.1■■□□□ 1.61
KDM5CP41229 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC25.1■■□□□ 1.61
KDM5CP41229 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
KDM5CP41229 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 AC073439.1-201ENST00000624121 1774 ntBASIC25.09■■□□□ 1.61
KDM5CP41229 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC25.09■■□□□ 1.61
KDM5CP41229 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC25.09■■□□□ 1.61
KDM5CP41229 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC25.09■■□□□ 1.61
KDM5CP41229 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC25.09■■□□□ 1.61
KDM5CP41229 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC25.09■■□□□ 1.61
KDM5CP41229 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC25.09■■□□□ 1.61
KDM5CP41229 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC25.09■■□□□ 1.61
KDM5CP41229 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
KDM5CP41229 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
KDM5CP41229 MTND6P24-201ENST00000440466 518 ntBASIC25.09■■□□□ 1.61
KDM5CP41229 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC25.09■■□□□ 1.61
KDM5CP41229 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC25.09■■□□□ 1.61
KDM5CP41229 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
KDM5CP41229 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC25.09■■□□□ 1.61
KDM5CP41229 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC25.08■■□□□ 1.61
KDM5CP41229 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC25.08■■□□□ 1.61
KDM5CP41229 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC25.08■■□□□ 1.61
KDM5CP41229 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
KDM5CP41229 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KDM5CP41229 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KDM5CP41229 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC25.08■■□□□ 1.61
KDM5CP41229 GNAQP1-201ENST00000444815 1067 ntBASIC25.08■■□□□ 1.61
KDM5CP41229 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
KDM5CP41229 AC055876.2-201ENST00000531834 546 ntBASIC25.08■■□□□ 1.61
KDM5CP41229 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC25.08■■□□□ 1.61
KDM5CP41229 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
KDM5CP41229 CHCHD2P3-201ENST00000603038 451 ntBASIC25.08■■□□□ 1.61
KDM5CP41229 MIR6799-201ENST00000620297 69 ntBASIC25.08■■□□□ 1.61
KDM5CP41229 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.08■■□□□ 1.61
KDM5CP41229 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC25.08■■□□□ 1.61
KDM5CP41229 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC25.08■■□□□ 1.61
KDM5CP41229 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
KDM5CP41229 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
KDM5CP41229 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
KDM5CP41229 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
KDM5CP41229 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM5CP41229 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
KDM5CP41229 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM5CP41229 STX3-203ENST00000529177 1571 ntTSL 2 BASIC25.07■■□□□ 1.6
KDM5CP41229 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM5CP41229 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
KDM5CP41229 GLI4-203ENST00000517468 963 ntTSL 5 BASIC25.07■■□□□ 1.6
KDM5CP41229 AC105021.1-202ENST00000570572 669 ntBASIC25.07■■□□□ 1.6
KDM5CP41229 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
KDM5CP41229 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC25.07■■□□□ 1.6
KDM5CP41229 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
KDM5CP41229 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
KDM5CP41229 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
KDM5CP41229 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC25.07■■□□□ 1.6
KDM5CP41229 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC25.07■■□□□ 1.6
KDM5CP41229 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
KDM5CP41229 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC25.06■■□□□ 1.6
KDM5CP41229 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM5CP41229 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
KDM5CP41229 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
KDM5CP41229 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
KDM5CP41229 MIR658-201ENST00000385210 100 ntBASIC25.06■■□□□ 1.6
KDM5CP41229 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
KDM5CP41229 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC25.06■■□□□ 1.6
KDM5CP41229 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC25.06■■□□□ 1.6
KDM5CP41229 SNX29P1-201ENST00000548357 1007 ntBASIC25.06■■□□□ 1.6
KDM5CP41229 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC25.06■■□□□ 1.6
KDM5CP41229 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC25.06■■□□□ 1.6
KDM5CP41229 NOC2LP2-201ENST00000407594 1944 ntBASIC25.06■■□□□ 1.6
KDM5CP41229 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
KDM5CP41229 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
KDM5CP41229 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC25.06■■□□□ 1.6
KDM5CP41229 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
KDM5CP41229 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC25.06■■□□□ 1.6
KDM5CP41229 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
KDM5CP41229 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
KDM5CP41229 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
KDM5CP41229 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
KDM5CP41229 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC25.05■■□□□ 1.6
KDM5CP41229 AC114501.2-201ENST00000439631 535 ntBASIC25.05■■□□□ 1.6
KDM5CP41229 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
KDM5CP41229 KRT17P8-201ENST00000540749 863 ntBASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms