Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.9□□□□□ -0.18
CEACAM3P40198 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.9□□□□□ -0.18
CEACAM3P40198 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CEACAM3P40198 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.9□□□□□ -0.18
CEACAM3P40198 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CEACAM3P40198 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.9□□□□□ -0.18
CEACAM3P40198 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM3P40198 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CEACAM3P40198 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
CEACAM3P40198 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CEACAM3P40198 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CEACAM3P40198 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CEACAM3P40198 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CEACAM3P40198 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.89□□□□□ -0.19
CEACAM3P40198 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM3P40198 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 AL021920.2-201ENST00000624828 1351 ntBASIC13.89□□□□□ -0.19
CEACAM3P40198 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 ELK2BP-201ENST00000415014 1224 ntBASIC13.89□□□□□ -0.19
CEACAM3P40198 KRT18P27-201ENST00000427733 1299 ntBASIC13.89□□□□□ -0.19
CEACAM3P40198 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.89□□□□□ -0.19
CEACAM3P40198 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM3P40198 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.89□□□□□ -0.19
CEACAM3P40198 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM3P40198 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.89□□□□□ -0.19
CEACAM3P40198 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.89□□□□□ -0.19
CEACAM3P40198 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CEACAM3P40198 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CEACAM3P40198 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CEACAM3P40198 PI4KAP1-204ENST00000612579 1703 ntBASIC13.89□□□□□ -0.19
CEACAM3P40198 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CEACAM3P40198 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM3P40198 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM3P40198 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM3P40198 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM3P40198 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CEACAM3P40198 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CEACAM3P40198 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CEACAM3P40198 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CEACAM3P40198 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CEACAM3P40198 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CEACAM3P40198 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CEACAM3P40198 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 MRPL3P1-201ENST00000400109 1033 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 AC026396.1-201ENST00000419388 421 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 HNRNPDP1-201ENST00000439535 754 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 RPS15P9-201ENST00000494093 319 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.88□□□□□ -0.19
CEACAM3P40198 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.88□□□□□ -0.19
CEACAM3P40198 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.88□□□□□ -0.19
CEACAM3P40198 SLC25A6P4-201ENST00000586535 553 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CEACAM3P40198 AC148477.8-201ENST00000624298 468 ntBASIC13.88□□□□□ -0.19
CEACAM3P40198 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.88□□□□□ -0.19
CEACAM3P40198 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CEACAM3P40198 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.88□□□□□ -0.19
CEACAM3P40198 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CEACAM3P40198 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms