Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.05□□□□□ -0.16
SNCAP37840 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.05□□□□□ -0.16
SNCAP37840 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.05□□□□□ -0.16
SNCAP37840 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.05□□□□□ -0.16
SNCAP37840 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.05□□□□□ -0.16
SNCAP37840 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.05□□□□□ -0.16
SNCAP37840 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
SNCAP37840 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SNCAP37840 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.05□□□□□ -0.16
SNCAP37840 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SNCAP37840 COX11P1-201ENST00000489116 835 ntBASIC14.05□□□□□ -0.16
SNCAP37840 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.05□□□□□ -0.16
SNCAP37840 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.05□□□□□ -0.16
SNCAP37840 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.05□□□□□ -0.16
SNCAP37840 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 AC004263.2-201ENST00000617183 678 ntBASIC14.05□□□□□ -0.16
SNCAP37840 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.05□□□□□ -0.16
SNCAP37840 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SNCAP37840 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 RNF216P1-203ENST00000404404 2427 ntBASIC14.05□□□□□ -0.16
SNCAP37840 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.05□□□□□ -0.16
SNCAP37840 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SNCAP37840 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SNCAP37840 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SNCAP37840 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SNCAP37840 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SNCAP37840 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SNCAP37840 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNCAP37840 AC092384.3-202ENST00000564646 2873 ntBASIC14.05□□□□□ -0.16
SNCAP37840 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.04□□□□□ -0.16
SNCAP37840 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.04□□□□□ -0.16
SNCAP37840 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SNCAP37840 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SNCAP37840 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SNCAP37840 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 AC078925.2-201ENST00000624013 1973 ntBASIC14.04□□□□□ -0.16
SNCAP37840 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.04□□□□□ -0.16
SNCAP37840 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SNCAP37840 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.04□□□□□ -0.16
SNCAP37840 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.04□□□□□ -0.16
SNCAP37840 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.04□□□□□ -0.16
SNCAP37840 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.04□□□□□ -0.16
SNCAP37840 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.04□□□□□ -0.16
SNCAP37840 ZNF444P1-201ENST00000559497 298 ntBASIC14.04□□□□□ -0.16
SNCAP37840 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 AC145285.6-201ENST00000604632 637 ntBASIC14.04□□□□□ -0.16
SNCAP37840 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 AL138966.2-201ENST00000621997 464 ntBASIC14.04□□□□□ -0.16
SNCAP37840 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.04□□□□□ -0.16
SNCAP37840 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SNCAP37840 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SNCAP37840 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.04□□□□□ -0.16
SNCAP37840 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.04□□□□□ -0.16
SNCAP37840 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms