Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.75■□□□□ 0.91
PDE6BP35913 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PDE6BP35913 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 KRT8P49-201ENST00000604166 1432 ntBASIC20.75■□□□□ 0.91
PDE6BP35913 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.75■□□□□ 0.91
PDE6BP35913 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.75■□□□□ 0.91
PDE6BP35913 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.75■□□□□ 0.91
PDE6BP35913 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.75■□□□□ 0.91
PDE6BP35913 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.75■□□□□ 0.91
PDE6BP35913 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDE6BP35913 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 AL021920.2-201ENST00000624828 1351 ntBASIC20.74■□□□□ 0.91
PDE6BP35913 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 RPL37AP1-201ENST00000412502 279 ntBASIC20.74■□□□□ 0.91
PDE6BP35913 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.74■□□□□ 0.91
PDE6BP35913 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.74■□□□□ 0.91
PDE6BP35913 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.74■□□□□ 0.91
PDE6BP35913 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.74■□□□□ 0.91
PDE6BP35913 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.74■□□□□ 0.91
PDE6BP35913 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.74■□□□□ 0.91
PDE6BP35913 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 ABALON-201ENST00000629058 1903 ntBASIC20.74■□□□□ 0.91
PDE6BP35913 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.74■□□□□ 0.91
PDE6BP35913 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDE6BP35913 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PDE6BP35913 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.74■□□□□ 0.91
PDE6BP35913 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PDE6BP35913 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PDE6BP35913 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.73■□□□□ 0.91
PDE6BP35913 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PDE6BP35913 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.73■□□□□ 0.91
PDE6BP35913 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDE6BP35913 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PDE6BP35913 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.73■□□□□ 0.91
PDE6BP35913 FAM220BP-201ENST00000377689 816 ntBASIC20.73■□□□□ 0.91
PDE6BP35913 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.73■□□□□ 0.91
PDE6BP35913 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
PDE6BP35913 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.73■□□□□ 0.91
PDE6BP35913 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.73■□□□□ 0.91
PDE6BP35913 GIMAP3P-201ENST00000495150 836 ntBASIC20.73■□□□□ 0.91
PDE6BP35913 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 MIR4492-201ENST00000581627 80 ntBASIC20.73■□□□□ 0.91
PDE6BP35913 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.73■□□□□ 0.91
PDE6BP35913 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.73■□□□□ 0.91
PDE6BP35913 RN7SL828P-201ENST00000607615 303 ntBASIC20.73■□□□□ 0.91
PDE6BP35913 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.73■□□□□ 0.91
PDE6BP35913 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.73■□□□□ 0.91
PDE6BP35913 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.73■□□□□ 0.91
PDE6BP35913 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.73■□□□□ 0.91
PDE6BP35913 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.73■□□□□ 0.91
PDE6BP35913 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.73■□□□□ 0.91
PDE6BP35913 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDE6BP35913 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PDE6BP35913 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PDE6BP35913 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 AL355312.1-201ENST00000407115 2176 ntBASIC20.72■□□□□ 0.91
PDE6BP35913 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.72■□□□□ 0.91
PDE6BP35913 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDE6BP35913 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.72■□□□□ 0.91
PDE6BP35913 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms