Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN3P20807 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.41■□□□□ 0.22
CAPN3P20807 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CAPN3P20807 MIR3180-1-201ENST00000580374 94 ntBASIC16.41■□□□□ 0.22
CAPN3P20807 MIR3180-3-201ENST00000584616 94 ntBASIC16.41■□□□□ 0.22
CAPN3P20807 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CAPN3P20807 AL353801.3-201ENST00000609898 542 ntBASIC16.41■□□□□ 0.22
CAPN3P20807 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN3P20807 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN3P20807 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN3P20807 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN3P20807 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN3P20807 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CAPN3P20807 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN3P20807 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN3P20807 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN3P20807 AL513523.2-202ENST00000427283 2040 ntBASIC16.41■□□□□ 0.22
CAPN3P20807 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN3P20807 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN3P20807 GPR89P-201ENST00000407924 1495 ntBASIC16.41■□□□□ 0.22
CAPN3P20807 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN3P20807 AL353593.2-201ENST00000602529 1483 ntBASIC16.41■□□□□ 0.22
CAPN3P20807 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN3P20807 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.41■□□□□ 0.22
CAPN3P20807 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CAPN3P20807 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.4■□□□□ 0.22
CAPN3P20807 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.4■□□□□ 0.22
CAPN3P20807 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CAPN3P20807 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CAPN3P20807 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN3P20807 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.4■□□□□ 0.22
CAPN3P20807 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.4■□□□□ 0.22
CAPN3P20807 OR6D1P-203ENST00000641209 4860 ntBASIC16.4■□□□□ 0.22
CAPN3P20807 AC009336.1-201ENST00000608941 1553 ntBASIC16.4■□□□□ 0.22
CAPN3P20807 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CAPN3P20807 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CAPN3P20807 TSPY19P-201ENST00000418461 509 ntBASIC16.4■□□□□ 0.22
CAPN3P20807 AC103564.2-201ENST00000432853 1299 ntBASIC16.4■□□□□ 0.22
CAPN3P20807 TSPY18P-201ENST00000441642 509 ntBASIC16.4■□□□□ 0.22
CAPN3P20807 RN7SL606P-201ENST00000472779 293 ntBASIC16.4■□□□□ 0.22
CAPN3P20807 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.4■□□□□ 0.22
CAPN3P20807 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.4■□□□□ 0.22
CAPN3P20807 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 AC091304.2-201ENST00000564639 760 ntBASIC16.4■□□□□ 0.22
CAPN3P20807 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.4■□□□□ 0.22
CAPN3P20807 AC104692.2-201ENST00000603054 253 ntBASIC16.4■□□□□ 0.22
CAPN3P20807 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.4■□□□□ 0.22
CAPN3P20807 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 AC007950.2-201ENST00000615045 2347 ntBASIC16.4■□□□□ 0.22
CAPN3P20807 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CAPN3P20807 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CAPN3P20807 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.39■□□□□ 0.22
CAPN3P20807 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPN3P20807 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPN3P20807 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CAPN3P20807 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CAPN3P20807 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.39■□□□□ 0.21
CAPN3P20807 EMBP1-201ENST00000458200 901 ntBASIC16.39■□□□□ 0.21
CAPN3P20807 AC106795.1-205ENST00000512851 1056 ntBASIC16.39■□□□□ 0.21
CAPN3P20807 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.39■□□□□ 0.21
CAPN3P20807 AL031008.1-201ENST00000619963 541 ntBASIC16.39■□□□□ 0.21
CAPN3P20807 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.39■□□□□ 0.21
CAPN3P20807 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CAPN3P20807 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CAPN3P20807 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CAPN3P20807 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.39■□□□□ 0.21
CAPN3P20807 AL391256.1-201ENST00000443260 1855 ntBASIC16.39■□□□□ 0.21
CAPN3P20807 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CAPN3P20807 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CAPN3P20807 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms