Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCF4P15884 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TCF4P15884 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TCF4P15884 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TCF4P15884 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.72■□□□□ 0.43
TCF4P15884 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
TCF4P15884 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TCF4P15884 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TCF4P15884 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TCF4P15884 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
TCF4P15884 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.71■□□□□ 0.43
TCF4P15884 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
TCF4P15884 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.71■□□□□ 0.43
TCF4P15884 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.71■□□□□ 0.43
TCF4P15884 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.71■□□□□ 0.43
TCF4P15884 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.71■□□□□ 0.43
TCF4P15884 AC079781.3-201ENST00000449110 356 ntBASIC17.71■□□□□ 0.43
TCF4P15884 SCARNA2-201ENST00000458748 420 ntBASIC17.71■□□□□ 0.43
TCF4P15884 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TCF4P15884 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.71■□□□□ 0.43
TCF4P15884 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.71■□□□□ 0.43
TCF4P15884 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.71■□□□□ 0.43
TCF4P15884 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.71■□□□□ 0.43
TCF4P15884 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.71■□□□□ 0.43
TCF4P15884 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.71■□□□□ 0.43
TCF4P15884 AC148477.8-201ENST00000624298 468 ntBASIC17.71■□□□□ 0.43
TCF4P15884 AC107918.4-202ENST00000641623 219 ntBASIC17.71■□□□□ 0.43
TCF4P15884 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TCF4P15884 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.71■□□□□ 0.43
TCF4P15884 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TCF4P15884 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TCF4P15884 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TCF4P15884 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCF4P15884 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
TCF4P15884 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.71■□□□□ 0.42
TCF4P15884 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
TCF4P15884 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TCF4P15884 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
TCF4P15884 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.7■□□□□ 0.42
TCF4P15884 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TCF4P15884 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 AC073621.1-201ENST00000392730 636 ntBASIC17.7■□□□□ 0.42
TCF4P15884 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.7■□□□□ 0.42
TCF4P15884 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.7■□□□□ 0.42
TCF4P15884 AC012640.2-201ENST00000561606 901 ntBASIC17.7■□□□□ 0.42
TCF4P15884 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TCF4P15884 LINC01711-201ENST00000598340 967 ntBASIC17.7■□□□□ 0.42
TCF4P15884 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.7■□□□□ 0.42
TCF4P15884 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.7■□□□□ 0.42
TCF4P15884 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.7■□□□□ 0.42
TCF4P15884 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
TCF4P15884 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TCF4P15884 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 AC092364.2-201ENST00000596710 2692 ntBASIC17.7■□□□□ 0.42
TCF4P15884 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TCF4P15884 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
TCF4P15884 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCF4P15884 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TCF4P15884 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.69■□□□□ 0.42
TCF4P15884 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TCF4P15884 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 ALOX12P2-203ENST00000570921 1945 ntBASIC17.69■□□□□ 0.42
TCF4P15884 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TCF4P15884 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCF4P15884 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TCF4P15884 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms