Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.26■□□□□ 0.19
BCKDHAP12694 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BCKDHAP12694 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
BCKDHAP12694 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.26■□□□□ 0.19
BCKDHAP12694 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
BCKDHAP12694 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BCKDHAP12694 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.26■□□□□ 0.19
BCKDHAP12694 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
BCKDHAP12694 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.26■□□□□ 0.19
BCKDHAP12694 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.26■□□□□ 0.19
BCKDHAP12694 AC010331.1-201ENST00000611423 582 ntBASIC16.26■□□□□ 0.19
BCKDHAP12694 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.26■□□□□ 0.19
BCKDHAP12694 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BCKDHAP12694 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.26■□□□□ 0.19
BCKDHAP12694 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
BCKDHAP12694 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
BCKDHAP12694 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 AP005117.1-201ENST00000584346 1413 ntBASIC16.26■□□□□ 0.19
BCKDHAP12694 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
BCKDHAP12694 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
BCKDHAP12694 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHAP12694 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BCKDHAP12694 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BCKDHAP12694 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.25■□□□□ 0.19
BCKDHAP12694 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.25■□□□□ 0.19
BCKDHAP12694 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
BCKDHAP12694 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.25■□□□□ 0.19
BCKDHAP12694 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.25■□□□□ 0.19
BCKDHAP12694 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
BCKDHAP12694 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.25■□□□□ 0.19
BCKDHAP12694 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 KRT16P4-201ENST00000453883 522 ntBASIC16.25■□□□□ 0.19
BCKDHAP12694 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.25■□□□□ 0.19
BCKDHAP12694 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.25■□□□□ 0.19
BCKDHAP12694 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.25■□□□□ 0.19
BCKDHAP12694 AC091076.1-201ENST00000610741 619 ntBASIC16.25■□□□□ 0.19
BCKDHAP12694 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BCKDHAP12694 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BCKDHAP12694 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHAP12694 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.24■□□□□ 0.19
BCKDHAP12694 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BCKDHAP12694 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BCKDHAP12694 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
BCKDHAP12694 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.24■□□□□ 0.19
BCKDHAP12694 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.24■□□□□ 0.19
BCKDHAP12694 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.24■□□□□ 0.19
BCKDHAP12694 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BCKDHAP12694 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 PRYP5-201ENST00000451909 266 ntBASIC16.24■□□□□ 0.19
BCKDHAP12694 AC132008.2-207ENST00000454517 770 ntBASIC16.24■□□□□ 0.19
BCKDHAP12694 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.24■□□□□ 0.19
BCKDHAP12694 KRT18P35-201ENST00000510488 1269 ntBASIC16.24■□□□□ 0.19
BCKDHAP12694 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.24■□□□□ 0.19
BCKDHAP12694 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
BCKDHAP12694 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.24■□□□□ 0.19
BCKDHAP12694 AC138894.3-201ENST00000603787 634 ntBASIC16.24■□□□□ 0.19
BCKDHAP12694 AL353135.1-201ENST00000606729 504 ntBASIC16.24■□□□□ 0.19
BCKDHAP12694 AP001269.4-201ENST00000609611 512 ntBASIC16.24■□□□□ 0.19
BCKDHAP12694 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
BCKDHAP12694 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BCKDHAP12694 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms