Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 DUX4L17-201ENST00000557360 1267 ntBASIC17.92■□□□□ 0.46
KRT3P12035 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
KRT3P12035 RN7SL510P-201ENST00000581311 263 ntBASIC17.92■□□□□ 0.46
KRT3P12035 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
KRT3P12035 AC006557.2-201ENST00000592985 1240 ntBASIC17.92■□□□□ 0.46
KRT3P12035 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT3P12035 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT3P12035 TP73-AS1-207ENST00000624167 988 ntBASIC17.92■□□□□ 0.46
KRT3P12035 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
KRT3P12035 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
KRT3P12035 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
KRT3P12035 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT3P12035 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT3P12035 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.92■□□□□ 0.46
KRT3P12035 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
KRT3P12035 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
KRT3P12035 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT3P12035 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KRT3P12035 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
KRT3P12035 AL021920.2-201ENST00000624828 1351 ntBASIC17.91■□□□□ 0.46
KRT3P12035 AC006504.4-201ENST00000592118 1568 ntBASIC17.91■□□□□ 0.46
KRT3P12035 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT3P12035 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT3P12035 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
KRT3P12035 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 FLJ38576-201ENST00000623820 2459 ntBASIC17.91■□□□□ 0.46
KRT3P12035 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
KRT3P12035 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 PTCHD3P3-201ENST00000403073 906 ntBASIC17.91■□□□□ 0.46
KRT3P12035 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT3P12035 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT3P12035 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT3P12035 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT3P12035 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.91■□□□□ 0.46
KRT3P12035 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.91■□□□□ 0.46
KRT3P12035 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT3P12035 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT3P12035 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT3P12035 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT3P12035 AL691432.3-201ENST00000621860 400 ntBASIC17.91■□□□□ 0.46
KRT3P12035 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT3P12035 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.91■□□□□ 0.46
KRT3P12035 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
KRT3P12035 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT3P12035 AC084018.2-201ENST00000613093 2607 ntBASIC17.91■□□□□ 0.46
KRT3P12035 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT3P12035 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
KRT3P12035 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT3P12035 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT3P12035 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT3P12035 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT3P12035 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
KRT3P12035 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT3P12035 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
KRT3P12035 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT3P12035 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT3P12035 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT3P12035 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 AC078925.2-201ENST00000624013 1973 ntBASIC17.9■□□□□ 0.46
KRT3P12035 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT3P12035 AC099398.1-201ENST00000567919 2776 ntBASIC17.9■□□□□ 0.46
KRT3P12035 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
KRT3P12035 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT3P12035 AC004870.1-201ENST00000315132 882 ntBASIC17.9■□□□□ 0.46
KRT3P12035 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT3P12035 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.9■□□□□ 0.46
KRT3P12035 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.9■□□□□ 0.46
KRT3P12035 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
KRT3P12035 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT3P12035 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT3P12035 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT3P12035 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms