Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
THRAP10827 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
THRAP10827 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.12■□□□□ 0.33
THRAP10827 DOC2GP-204ENST00000639052 2548 ntBASIC17.12■□□□□ 0.33
THRAP10827 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.12■□□□□ 0.33
THRAP10827 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THRAP10827 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.12■□□□□ 0.33
THRAP10827 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
THRAP10827 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.11■□□□□ 0.33
THRAP10827 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
THRAP10827 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.11■□□□□ 0.33
THRAP10827 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
THRAP10827 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.11■□□□□ 0.33
THRAP10827 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.11■□□□□ 0.33
THRAP10827 KRT18P58-201ENST00000527480 1120 ntBASIC17.11■□□□□ 0.33
THRAP10827 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.11■□□□□ 0.33
THRAP10827 AC106730.1-201ENST00000566722 1090 ntBASIC17.11■□□□□ 0.33
THRAP10827 GPALPP1-207ENST00000611650 899 ntBASIC17.11■□□□□ 0.33
THRAP10827 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.11■□□□□ 0.33
THRAP10827 AC117500.6-201ENST00000624871 588 ntBASIC17.11■□□□□ 0.33
THRAP10827 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.11■□□□□ 0.33
THRAP10827 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
THRAP10827 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
THRAP10827 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.11■□□□□ 0.33
THRAP10827 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
THRAP10827 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
THRAP10827 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.1■□□□□ 0.33
THRAP10827 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.1■□□□□ 0.33
THRAP10827 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
THRAP10827 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.1■□□□□ 0.33
THRAP10827 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
THRAP10827 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.1■□□□□ 0.33
THRAP10827 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.1■□□□□ 0.33
THRAP10827 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.1■□□□□ 0.33
THRAP10827 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
THRAP10827 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.1■□□□□ 0.33
THRAP10827 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.1■□□□□ 0.33
THRAP10827 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.1■□□□□ 0.33
THRAP10827 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.1■□□□□ 0.33
THRAP10827 AC116407.3-201ENST00000623905 1129 ntBASIC17.1■□□□□ 0.33
THRAP10827 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.1■□□□□ 0.33
THRAP10827 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
THRAP10827 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
THRAP10827 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
THRAP10827 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
THRAP10827 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
THRAP10827 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 FLJ38576-201ENST00000623820 2459 ntBASIC17.09■□□□□ 0.33
THRAP10827 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
THRAP10827 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
THRAP10827 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.09■□□□□ 0.33
THRAP10827 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.09■□□□□ 0.33
THRAP10827 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
THRAP10827 AC096633.1-201ENST00000422446 749 ntBASIC17.09■□□□□ 0.33
THRAP10827 RPS2P1-201ENST00000434010 821 ntBASIC17.09■□□□□ 0.33
THRAP10827 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.09■□□□□ 0.33
THRAP10827 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 AP000867.4-201ENST00000641616 219 ntBASIC17.09■□□□□ 0.33
THRAP10827 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms