Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
MMP2P08253 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.07■□□□□ 0.32
MMP2P08253 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.07■□□□□ 0.32
MMP2P08253 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.07■□□□□ 0.32
MMP2P08253 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 AC091167.2-201ENST00000579581 588 ntBASIC17.07■□□□□ 0.32
MMP2P08253 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP2P08253 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
MMP2P08253 AC120114.3-201ENST00000611923 658 ntBASIC17.07■□□□□ 0.32
MMP2P08253 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.07■□□□□ 0.32
MMP2P08253 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP2P08253 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MMP2P08253 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP2P08253 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP2P08253 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP2P08253 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.06■□□□□ 0.32
MMP2P08253 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.06■□□□□ 0.32
MMP2P08253 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
MMP2P08253 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 HTR7P1-202ENST00000624664 4411 ntBASIC17.06■□□□□ 0.32
MMP2P08253 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MMP2P08253 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP2P08253 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MMP2P08253 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP2P08253 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP2P08253 AL353732.1-201ENST00000569618 1459 ntBASIC17.05■□□□□ 0.32
MMP2P08253 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MMP2P08253 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MMP2P08253 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP2P08253 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 AC131009.4-201ENST00000624048 1740 ntBASIC17.05■□□□□ 0.32
MMP2P08253 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.05■□□□□ 0.32
MMP2P08253 AC099398.1-201ENST00000567919 2776 ntBASIC17.05■□□□□ 0.32
MMP2P08253 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MMP2P08253 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP2P08253 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP2P08253 CRYGEP-201ENST00000412192 528 ntBASIC17.05■□□□□ 0.32
MMP2P08253 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MMP2P08253 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.05■□□□□ 0.32
MMP2P08253 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MMP2P08253 CXCL1P1-201ENST00000502804 216 ntBASIC17.05■□□□□ 0.32
MMP2P08253 AC005412.3-201ENST00000580309 715 ntBASIC17.05■□□□□ 0.32
MMP2P08253 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP2P08253 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP2P08253 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP2P08253 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms