Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPP05067 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPP05067 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPP05067 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPP05067 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPP05067 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.4■□□□□ 0.86
APPP05067 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
APPP05067 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
APPP05067 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.4■□□□□ 0.86
APPP05067 AL591424.1-201ENST00000442569 1213 ntBASIC20.4■□□□□ 0.86
APPP05067 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APPP05067 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APPP05067 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APPP05067 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APPP05067 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.4■□□□□ 0.86
APPP05067 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
APPP05067 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
APPP05067 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.86
APPP05067 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
APPP05067 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
APPP05067 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
APPP05067 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
APPP05067 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
APPP05067 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPP05067 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APPP05067 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
APPP05067 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
APPP05067 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPP05067 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPP05067 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPP05067 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
APPP05067 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.39■□□□□ 0.85
APPP05067 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
APPP05067 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
APPP05067 SLC25A6P2-201ENST00000497974 877 ntBASIC20.39■□□□□ 0.85
APPP05067 RNA5SP416-201ENST00000516838 111 ntBASIC20.39■□□□□ 0.85
APPP05067 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.39■□□□□ 0.85
APPP05067 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.39■□□□□ 0.85
APPP05067 OR7E47P-204ENST00000575924 449 ntBASIC20.39■□□□□ 0.85
APPP05067 FAM197Y3-203ENST00000618346 717 ntBASIC20.39■□□□□ 0.85
APPP05067 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPP05067 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APPP05067 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.39■□□□□ 0.85
APPP05067 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.39■□□□□ 0.85
APPP05067 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.39■□□□□ 0.85
APPP05067 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPP05067 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APPP05067 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APPP05067 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.39■□□□□ 0.85
APPP05067 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.38■□□□□ 0.85
APPP05067 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
APPP05067 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
APPP05067 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.38■□□□□ 0.85
APPP05067 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.38■□□□□ 0.85
APPP05067 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
APPP05067 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.38■□□□□ 0.85
APPP05067 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.38■□□□□ 0.85
APPP05067 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.38■□□□□ 0.85
APPP05067 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
APPP05067 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
APPP05067 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APPP05067 FRMD8P1-201ENST00000440433 1524 ntBASIC20.37■□□□□ 0.85
APPP05067 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.37■□□□□ 0.85
APPP05067 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPP05067 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
APPP05067 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
APPP05067 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPP05067 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.37■□□□□ 0.85
APPP05067 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPP05067 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
APPP05067 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
APPP05067 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.37■□□□□ 0.85
APPP05067 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
APPP05067 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.37■□□□□ 0.85
APPP05067 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.37■□□□□ 0.85
APPP05067 KRT18P2-201ENST00000447938 1258 ntBASIC20.37■□□□□ 0.85
APPP05067 HCG4B-203ENST00000450128 991 ntBASIC20.37■□□□□ 0.85
APPP05067 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.37■□□□□ 0.85
APPP05067 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.37■□□□□ 0.85
APPP05067 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms