Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC10.42□□□□□ -0.74
APOBP04114 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOBP04114 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOBP04114 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOBP04114 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
APOBP04114 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC10.42□□□□□ -0.74
APOBP04114 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC10.42□□□□□ -0.74
APOBP04114 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.42□□□□□ -0.74
APOBP04114 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC10.42□□□□□ -0.74
APOBP04114 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC10.42□□□□□ -0.74
APOBP04114 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOBP04114 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOBP04114 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOBP04114 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
APOBP04114 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
APOBP04114 AC131009.4-201ENST00000624048 1740 ntBASIC10.41□□□□□ -0.74
APOBP04114 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC10.41□□□□□ -0.74
APOBP04114 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC10.41□□□□□ -0.74
APOBP04114 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC10.41□□□□□ -0.74
APOBP04114 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.41□□□□□ -0.74
APOBP04114 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 CDK2AP2P3-201ENST00000422476 372 ntBASIC10.41□□□□□ -0.74
APOBP04114 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC10.41□□□□□ -0.74
APOBP04114 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC10.41□□□□□ -0.74
APOBP04114 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.41□□□□□ -0.74
APOBP04114 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC10.41□□□□□ -0.74
APOBP04114 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.41□□□□□ -0.74
APOBP04114 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
APOBP04114 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC10.41□□□□□ -0.74
APOBP04114 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.41□□□□□ -0.74
APOBP04114 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 AC114501.2-201ENST00000439631 535 ntBASIC10.41□□□□□ -0.74
APOBP04114 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 AC092337.1-201ENST00000568699 1129 ntBASIC10.41□□□□□ -0.74
APOBP04114 BTNL10-201ENST00000595971 695 ntBASIC10.41□□□□□ -0.74
APOBP04114 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.41□□□□□ -0.74
APOBP04114 SRD5A3P1-201ENST00000603021 949 ntBASIC10.41□□□□□ -0.74
APOBP04114 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
APOBP04114 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 CSF2RBP1-201ENST00000447905 391 ntBASIC10.41□□□□□ -0.74
APOBP04114 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC10.41□□□□□ -0.74
APOBP04114 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.41□□□□□ -0.74
APOBP04114 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC10.41□□□□□ -0.74
APOBP04114 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
APOBP04114 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.4□□□□□ -0.74
APOBP04114 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
APOBP04114 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
APOBP04114 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.4□□□□□ -0.74
APOBP04114 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC10.4□□□□□ -0.74
APOBP04114 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
APOBP04114 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
APOBP04114 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC10.4□□□□□ -0.74
APOBP04114 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.4□□□□□ -0.74
APOBP04114 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC10.4□□□□□ -0.74
APOBP04114 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms