Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GGPS1O95749 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
GGPS1O95749 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GGPS1O95749 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.02■□□□□ 0.64
GGPS1O95749 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GGPS1O95749 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.02■□□□□ 0.64
GGPS1O95749 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.02■□□□□ 0.64
GGPS1O95749 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.02■□□□□ 0.64
GGPS1O95749 SPDYE11-202ENST00000450699 704 ntBASIC19.02■□□□□ 0.64
GGPS1O95749 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.02■□□□□ 0.64
GGPS1O95749 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.02■□□□□ 0.64
GGPS1O95749 AC023141.5-201ENST00000458585 616 ntBASIC19.02■□□□□ 0.64
GGPS1O95749 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.02■□□□□ 0.64
GGPS1O95749 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.02■□□□□ 0.64
GGPS1O95749 FAM86C2P-203ENST00000528684 1004 ntBASIC19.02■□□□□ 0.64
GGPS1O95749 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GGPS1O95749 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.02■□□□□ 0.64
GGPS1O95749 SPDYE9P-201ENST00000570642 692 ntBASIC19.02■□□□□ 0.64
GGPS1O95749 SPDYE10P-202ENST00000612005 668 ntBASIC19.02■□□□□ 0.64
GGPS1O95749 SPDYE8P-202ENST00000612377 668 ntBASIC19.02■□□□□ 0.64
GGPS1O95749 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GGPS1O95749 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
GGPS1O95749 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GGPS1O95749 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GGPS1O95749 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GGPS1O95749 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
GGPS1O95749 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
GGPS1O95749 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
GGPS1O95749 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GGPS1O95749 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
GGPS1O95749 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
GGPS1O95749 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
GGPS1O95749 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.02■□□□□ 0.63
GGPS1O95749 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
GGPS1O95749 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
GGPS1O95749 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
GGPS1O95749 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
GGPS1O95749 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.01■□□□□ 0.63
GGPS1O95749 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.01■□□□□ 0.63
GGPS1O95749 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.01■□□□□ 0.63
GGPS1O95749 AC004449.1-201ENST00000564240 433 ntBASIC19.01■□□□□ 0.63
GGPS1O95749 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.01■□□□□ 0.63
GGPS1O95749 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.01■□□□□ 0.63
GGPS1O95749 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.01■□□□□ 0.63
GGPS1O95749 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 TOP3BP1-201ENST00000420768 1380 ntBASIC19.01■□□□□ 0.63
GGPS1O95749 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GGPS1O95749 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GGPS1O95749 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GGPS1O95749 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GGPS1O95749 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GGPS1O95749 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19■□□□□ 0.63
GGPS1O95749 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
GGPS1O95749 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19■□□□□ 0.63
GGPS1O95749 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19■□□□□ 0.63
GGPS1O95749 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GGPS1O95749 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GGPS1O95749 TFAMP1-201ENST00000412727 736 ntBASIC19■□□□□ 0.63
GGPS1O95749 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19■□□□□ 0.63
GGPS1O95749 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
GGPS1O95749 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19■□□□□ 0.63
GGPS1O95749 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19■□□□□ 0.63
GGPS1O95749 AC093520.2-201ENST00000561830 333 ntBASIC19■□□□□ 0.63
GGPS1O95749 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19■□□□□ 0.63
GGPS1O95749 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19■□□□□ 0.63
GGPS1O95749 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19■□□□□ 0.63
GGPS1O95749 SLC22A20-204ENST00000530038 1673 ntBASIC19■□□□□ 0.63
GGPS1O95749 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GGPS1O95749 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
GGPS1O95749 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
GGPS1O95749 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
GGPS1O95749 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19■□□□□ 0.63
GGPS1O95749 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19■□□□□ 0.63
GGPS1O95749 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
GGPS1O95749 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19■□□□□ 0.63
GGPS1O95749 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19■□□□□ 0.63
GGPS1O95749 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
GGPS1O95749 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19■□□□□ 0.63
GGPS1O95749 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
GGPS1O95749 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 AL645608.8-201ENST00000606034 2086 ntBASIC18.99■□□□□ 0.63
GGPS1O95749 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.99■□□□□ 0.63
GGPS1O95749 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.99■□□□□ 0.63
GGPS1O95749 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GGPS1O95749 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms