Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 AC060834.1-201ENST00000443027 2032 ntBASIC15.87■□□□□ 0.13
SOX30O94993 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX30O94993 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX30O94993 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SOX30O94993 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SOX30O94993 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX30O94993 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX30O94993 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX30O94993 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX30O94993 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SOX30O94993 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.86■□□□□ 0.13
SOX30O94993 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.86■□□□□ 0.13
SOX30O94993 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 BX005266.1-201ENST00000473402 457 ntBASIC15.86■□□□□ 0.13
SOX30O94993 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.86■□□□□ 0.13
SOX30O94993 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.86■□□□□ 0.13
SOX30O94993 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 MTDHP4-201ENST00000600287 670 ntBASIC15.86■□□□□ 0.13
SOX30O94993 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.86■□□□□ 0.13
SOX30O94993 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SOX30O94993 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
SOX30O94993 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX30O94993 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SOX30O94993 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 AC092053.1-201ENST00000605787 1936 ntBASIC15.86■□□□□ 0.13
SOX30O94993 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX30O94993 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.85■□□□□ 0.13
SOX30O94993 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SOX30O94993 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SOX30O94993 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.85■□□□□ 0.13
SOX30O94993 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SOX30O94993 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.85■□□□□ 0.13
SOX30O94993 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SOX30O94993 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.85■□□□□ 0.13
SOX30O94993 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 LAGE3P1-201ENST00000425356 484 ntBASIC15.85■□□□□ 0.13
SOX30O94993 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.85■□□□□ 0.13
SOX30O94993 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.85■□□□□ 0.13
SOX30O94993 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.85■□□□□ 0.13
SOX30O94993 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.85■□□□□ 0.13
SOX30O94993 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SOX30O94993 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SOX30O94993 AC004706.3-202ENST00000621574 984 ntBASIC15.85■□□□□ 0.13
SOX30O94993 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SOX30O94993 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
SOX30O94993 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SOX30O94993 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.85■□□□□ 0.13
SOX30O94993 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SOX30O94993 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX30O94993 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX30O94993 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX30O94993 AC105020.1-201ENST00000435356 2205 ntBASIC15.84■□□□□ 0.13
SOX30O94993 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX30O94993 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SOX30O94993 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX30O94993 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SOX30O94993 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX30O94993 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX30O94993 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SOX30O94993 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SOX30O94993 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX30O94993 RPS2P28-201ENST00000314255 741 ntBASIC15.84■□□□□ 0.13
SOX30O94993 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX30O94993 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SOX30O94993 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms