Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 LINC02012-201ENST00000608206 1725 ntBASIC13.32□□□□□ -0.28
ZNF253O75346 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ZNF253O75346 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ZNF253O75346 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.32□□□□□ -0.28
ZNF253O75346 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
ZNF253O75346 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF253O75346 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF253O75346 AL353692.3-201ENST00000407031 1396 ntBASIC13.32□□□□□ -0.28
ZNF253O75346 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF253O75346 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF253O75346 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF253O75346 AL161772.1-201ENST00000610494 4412 ntBASIC13.31□□□□□ -0.28
ZNF253O75346 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF253O75346 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF253O75346 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ZNF253O75346 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ZNF253O75346 COX5BP2-201ENST00000392354 334 ntBASIC13.31□□□□□ -0.28
ZNF253O75346 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF253O75346 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF253O75346 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.31□□□□□ -0.28
ZNF253O75346 AC068472.1-201ENST00000474589 881 ntBASIC13.31□□□□□ -0.28
ZNF253O75346 AP003733.1-201ENST00000491725 852 ntBASIC13.31□□□□□ -0.28
ZNF253O75346 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF253O75346 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
ZNF253O75346 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF253O75346 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF253O75346 GPR32P1-201ENST00000601788 811 ntBASIC13.31□□□□□ -0.28
ZNF253O75346 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF253O75346 AL023973.1-201ENST00000624619 620 ntBASIC13.31□□□□□ -0.28
ZNF253O75346 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF253O75346 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ZNF253O75346 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ZNF253O75346 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF253O75346 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF253O75346 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
ZNF253O75346 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ZNF253O75346 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.3□□□□□ -0.28
ZNF253O75346 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
ZNF253O75346 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
ZNF253O75346 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.3□□□□□ -0.28
ZNF253O75346 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 AC006449.5-201ENST00000610658 2098 ntBASIC13.3□□□□□ -0.28
ZNF253O75346 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.3□□□□□ -0.28
ZNF253O75346 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.3□□□□□ -0.28
ZNF253O75346 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.3□□□□□ -0.28
ZNF253O75346 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ZNF253O75346 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF253O75346 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms