Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDH7O60245 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH7O60245 AP002490.2-201ENST00000524791 560 ntBASIC16.26■□□□□ 0.19
PCDH7O60245 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
PCDH7O60245 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH7O60245 AC064862.7-201ENST00000604520 867 ntBASIC16.26■□□□□ 0.19
PCDH7O60245 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDH7O60245 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDH7O60245 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDH7O60245 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH7O60245 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PCDH7O60245 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH7O60245 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDH7O60245 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH7O60245 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDH7O60245 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
PCDH7O60245 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDH7O60245 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDH7O60245 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH7O60245 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDH7O60245 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDH7O60245 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PCDH7O60245 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDH7O60245 DUX4L17-201ENST00000557360 1267 ntBASIC16.25■□□□□ 0.19
PCDH7O60245 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDH7O60245 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH7O60245 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH7O60245 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH7O60245 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PCDH7O60245 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDH7O60245 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH7O60245 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDH7O60245 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH7O60245 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDH7O60245 AC243591.1-201ENST00000452967 1364 ntBASIC16.25■□□□□ 0.19
PCDH7O60245 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.25■□□□□ 0.19
PCDH7O60245 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH7O60245 AL021920.2-201ENST00000624828 1351 ntBASIC16.25■□□□□ 0.19
PCDH7O60245 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDH7O60245 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDH7O60245 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH7O60245 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDH7O60245 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH7O60245 FGFR3P6-201ENST00000457012 610 ntBASIC16.24■□□□□ 0.19
PCDH7O60245 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDH7O60245 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH7O60245 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
PCDH7O60245 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 AL589182.2-201ENST00000619332 1049 ntBASIC16.24■□□□□ 0.19
PCDH7O60245 REXO1L6P-202ENST00000619970 1078 ntBASIC16.24■□□□□ 0.19
PCDH7O60245 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH7O60245 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PCDH7O60245 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH7O60245 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PCDH7O60245 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH7O60245 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
PCDH7O60245 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH7O60245 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH7O60245 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDH7O60245 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms