Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 AC008667.4-201ENST00000607370 168 ntBASIC18.14■□□□□ 0.49
O00370 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
O00370 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.14■□□□□ 0.49
O00370 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 RNF216P1-203ENST00000404404 2427 ntBASIC18.14■□□□□ 0.49
O00370 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.14■□□□□ 0.49
O00370 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.14■□□□□ 0.49
O00370 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 AC105020.1-201ENST00000435356 2205 ntBASIC18.14■□□□□ 0.49
O00370 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.14■□□□□ 0.49
O00370 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.14■□□□□ 0.49
O00370 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
O00370 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
O00370 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
O00370 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
O00370 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
O00370 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.13■□□□□ 0.49
O00370 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.13■□□□□ 0.49
O00370 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.13■□□□□ 0.49
O00370 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.13■□□□□ 0.49
O00370 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
O00370 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.13■□□□□ 0.49
O00370 AC098831.1-202ENST00000438821 336 ntBASIC18.13■□□□□ 0.49
O00370 IGHV3-65-201ENST00000523210 341 ntBASIC18.13■□□□□ 0.49
O00370 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.13■□□□□ 0.49
O00370 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.13■□□□□ 0.49
O00370 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.13■□□□□ 0.49
O00370 AC005593.1-201ENST00000624894 515 ntBASIC18.13■□□□□ 0.49
O00370 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.13■□□□□ 0.49
O00370 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.13■□□□□ 0.49
O00370 PGM5P2-202ENST00000637225 1043 ntBASIC18.13■□□□□ 0.49
O00370 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.13■□□□□ 0.49
O00370 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
O00370 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
O00370 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.12■□□□□ 0.49
O00370 PI4KAP1-204ENST00000612579 1703 ntBASIC18.12■□□□□ 0.49
O00370 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
O00370 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.12■□□□□ 0.49
O00370 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.12■□□□□ 0.49
O00370 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.12■□□□□ 0.49
O00370 IGHV3-22-201ENST00000520721 359 ntBASIC18.12■□□□□ 0.49
O00370 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.12■□□□□ 0.49
O00370 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.12■□□□□ 0.49
O00370 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.12■□□□□ 0.49
O00370 AF228730.7-201ENST00000641842 219 ntBASIC18.12■□□□□ 0.49
O00370 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
O00370 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.12■□□□□ 0.49
O00370 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.12■□□□□ 0.49
O00370 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.12■□□□□ 0.49
O00370 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.12■□□□□ 0.49
O00370 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.12■□□□□ 0.49
O00370 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.12■□□□□ 0.49
O00370 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
O00370 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
O00370 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
O00370 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
O00370 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
O00370 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.11■□□□□ 0.49
O00370 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms