Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 AC006504.4-201ENST00000592118 1568 ntBASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 AC078925.2-201ENST00000624013 1973 ntBASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 ELK2BP-201ENST00000415014 1224 ntBASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 LAGE3P1-201ENST00000425356 484 ntBASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 AC079781.3-201ENST00000449110 356 ntBASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 AC073648.2-201ENST00000510116 352 ntBASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC162PA2VCL2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 PTCHD3P3-201ENST00000403073 906 ntBASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 FAM197Y8-203ENST00000450145 560 ntBASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC162PA2VCL2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC162PA2VCL2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC162PA2VCL2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.02■□□□□ 0.31
CCDC162PA2VCL2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC162PA2VCL2 AL596257.1-201ENST00000641463 2694 ntBASIC17.02■□□□□ 0.31
CCDC162PA2VCL2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC162PA2VCL2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC162PA2VCL2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC162PA2VCL2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.02■□□□□ 0.31
CCDC162PA2VCL2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 HNRNPDP1-201ENST00000439535 754 ntBASIC17.01■□□□□ 0.31
CCDC162PA2VCL2 OR7E14P-202ENST00000530490 1290 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms