Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHISA3A0PJX4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 AL353593.2-201ENST00000602529 1483 ntBASIC14.84□□□□□ -0.03
SHISA3A0PJX4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 AL441883.1-201ENST00000566170 1045 ntBASIC14.84□□□□□ -0.03
SHISA3A0PJX4 AC111152.3-201ENST00000569699 673 ntBASIC14.84□□□□□ -0.03
SHISA3A0PJX4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 LINC00895-201ENST00000629028 1637 ntBASIC14.84□□□□□ -0.03
SHISA3A0PJX4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.84□□□□□ -0.03
SHISA3A0PJX4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHISA3A0PJX4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHISA3A0PJX4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SHISA3A0PJX4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SHISA3A0PJX4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.83□□□□□ -0.03
SHISA3A0PJX4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHISA3A0PJX4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
SHISA3A0PJX4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SHISA3A0PJX4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHISA3A0PJX4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 AC005332.3-201ENST00000589904 676 ntBASIC14.83□□□□□ -0.04
SHISA3A0PJX4 AL390719.2-201ENST00000606993 987 ntBASIC14.83□□□□□ -0.04
SHISA3A0PJX4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SHISA3A0PJX4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms