Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 AP002414.1-201ENST00000391405 1147 ntBASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 AP002383.4-201ENST00000442518 975 ntBASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 TOB2P1-201ENST00000469761 992 ntBASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 AC097637.2-201ENST00000624096 1997 ntBASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 CROCCP1-201ENST00000426910 5675 ntBASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 IGHV3-47-201ENST00000425060 335 ntBASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 AC114341.1-201ENST00000618070 349 ntBASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 AC116407.4-201ENST00000623319 1061 ntBASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.13■□□□□ 0.33
TCRBV9S1A1TA0A576 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 AC007950.2-201ENST00000615045 2347 ntBASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 AP002414.4-201ENST00000589764 1148 ntBASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.12■□□□□ 0.33
TCRBV9S1A1TA0A576 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms