Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 MIR4751-201ENST00000578027 74 ntBASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 STK25P1-201ENST00000585406 838 ntBASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 AL355385.1-201ENST00000606123 409 ntBASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 AL805961.1-202ENST00000641562 540 ntBASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 AC022211.2-201ENST00000585075 2527 ntBASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHGA3Q9Y5H0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 BX276092.7-203ENST00000637198 1536 ntBASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 HMGN1P19-201ENST00000436976 333 ntBASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 DDX43P3-201ENST00000441064 443 ntBASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 AC027796.2-201ENST00000575326 344 ntBASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 C20orf181-201ENST00000623918 480 ntBASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHGA3Q9Y5H0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 NKILA-202ENST00000614771 2598 ntBASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA3Q9Y5H0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms