Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 ELK2BP-201ENST00000415014 1224 ntBASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 AC023274.1-201ENST00000418278 595 ntBASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 PRSS29P-201ENST00000440800 595 ntBASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 AC008667.4-201ENST00000607370 168 ntBASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 AC148477.5-201ENST00000625164 1645 ntBASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA6Q9Y5G7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CRYGEP-201ENST00000412192 528 ntBASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 DDX43P3-201ENST00000441064 443 ntBASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 IGHV3-65-201ENST00000523210 341 ntBASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 AC134684.3-201ENST00000641758 218 ntBASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 LINC00304-203ENST00000565008 1864 ntBASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 UBALD1-205ENST00000590891 2641 ntBASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA6Q9Y5G7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 BX276092.7-203ENST00000637198 1536 ntBASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA6Q9Y5G7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms