Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
YIPF1Q9Y548 UXT-AS1-201ENST00000590504 1525 ntBASIC17.67■□□□□ 0.42
YIPF1Q9Y548 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 KRT8P23-201ENST00000560090 1207 ntBASIC17.67■□□□□ 0.42
YIPF1Q9Y548 CYP2A7P1-201ENST00000595391 815 ntBASIC17.67■□□□□ 0.42
YIPF1Q9Y548 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 AC016027.1-202ENST00000607927 1699 ntBASIC17.67■□□□□ 0.42
YIPF1Q9Y548 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
YIPF1Q9Y548 LINC02012-201ENST00000608206 1725 ntBASIC17.67■□□□□ 0.42
YIPF1Q9Y548 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 RBPMS2P1-201ENST00000437762 623 ntBASIC17.66■□□□□ 0.42
YIPF1Q9Y548 CNN2P2-201ENST00000443536 909 ntBASIC17.66■□□□□ 0.42
YIPF1Q9Y548 CNN2P3-201ENST00000450201 906 ntBASIC17.66■□□□□ 0.42
YIPF1Q9Y548 AC067863.1-201ENST00000494933 530 ntBASIC17.66■□□□□ 0.42
YIPF1Q9Y548 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 SPCS2P1-201ENST00000561636 679 ntBASIC17.66■□□□□ 0.42
YIPF1Q9Y548 AC005498.2-205ENST00000593218 784 ntBASIC17.66■□□□□ 0.42
YIPF1Q9Y548 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 AL136317.3-201ENST00000618497 906 ntBASIC17.66■□□□□ 0.42
YIPF1Q9Y548 AP001059.3-201ENST00000619053 235 ntBASIC17.66■□□□□ 0.42
YIPF1Q9Y548 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 LINC00896-202ENST00000609602 2128 ntBASIC17.66■□□□□ 0.42
YIPF1Q9Y548 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
YIPF1Q9Y548 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 AC068880.1-201ENST00000507289 2297 ntBASIC17.65■□□□□ 0.42
YIPF1Q9Y548 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 FAM8A3P-201ENST00000427218 844 ntBASIC17.65■□□□□ 0.42
YIPF1Q9Y548 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 AL512356.2-201ENST00000546955 174 ntBASIC17.65■□□□□ 0.42
YIPF1Q9Y548 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 MIR4492-201ENST00000581627 80 ntBASIC17.65■□□□□ 0.42
YIPF1Q9Y548 MIR3197-201ENST00000582241 73 ntBASIC17.65■□□□□ 0.42
YIPF1Q9Y548 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
YIPF1Q9Y548 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms