Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 AC106730.1-201ENST00000566722 1090 ntBASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 AC009053.2-201ENST00000563701 2365 ntBASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.66■□□□□ 0.1
RPH3AQ9Y2J0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 AC108860.2-201ENST00000562760 2183 ntBASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 KRT18P27-201ENST00000427733 1299 ntBASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 AC136632.2-201ENST00000512891 861 ntBASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 AC005593.1-201ENST00000624894 515 ntBASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 AC124067.4-201ENST00000519691 2379 ntBASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPH3AQ9Y2J0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 ACTG1P4-201ENST00000425123 1122 ntBASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 RPL13AP23-201ENST00000480739 586 ntBASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 AL353135.1-201ENST00000606729 504 ntBASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.64■□□□□ 0.09
RPH3AQ9Y2J0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms