Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.15■□□□□ 0.18
LHX6Q9UPM6 AL138781.2-201ENST00000617896 1843 ntBASIC16.15■□□□□ 0.18
LHX6Q9UPM6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LHX6Q9UPM6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.14■□□□□ 0.18
LHX6Q9UPM6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 RPL12P24-201ENST00000474907 486 ntBASIC16.14■□□□□ 0.17
LHX6Q9UPM6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LHX6Q9UPM6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 ESPNP-201ENST00000270691 2015 ntBASIC16.13■□□□□ 0.17
LHX6Q9UPM6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 GPS2P2-201ENST00000430745 888 ntBASIC16.13■□□□□ 0.17
LHX6Q9UPM6 AC103564.2-201ENST00000432853 1299 ntBASIC16.13■□□□□ 0.17
LHX6Q9UPM6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 RN7SL589P-201ENST00000481268 310 ntBASIC16.13■□□□□ 0.17
LHX6Q9UPM6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LHX6Q9UPM6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms