Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 MIR346-201ENST00000362234 95 ntBASIC19.5■□□□□ 0.71
PNMA3Q9UL41 GAPDHP21-201ENST00000450301 1010 ntBASIC19.5■□□□□ 0.71
PNMA3Q9UL41 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 AC027307.3-201ENST00000594262 1100 ntBASIC19.5■□□□□ 0.71
PNMA3Q9UL41 AL358472.5-202ENST00000641448 1267 ntBASIC19.5■□□□□ 0.71
PNMA3Q9UL41 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PNMA3Q9UL41 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 TOP3BP1-201ENST00000420768 1380 ntBASIC19.49■□□□□ 0.71
PNMA3Q9UL41 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 GK-202ENST00000378941 458 ntTSL 3 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 AC241585.1-201ENST00000433527 519 ntBASIC19.49■□□□□ 0.71
PNMA3Q9UL41 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PNMA3Q9UL41 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 GNAS-203ENST00000306120 1878 ntBASIC19.48■□□□□ 0.71
PNMA3Q9UL41 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 AC020763.4-201ENST00000623414 4170 ntBASIC19.48■□□□□ 0.71
PNMA3Q9UL41 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 AC138932.1-201ENST00000534164 6830 ntBASIC19.48■□□□□ 0.71
PNMA3Q9UL41 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.48■□□□□ 0.71
PNMA3Q9UL41 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PNMA3Q9UL41 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms