Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 FAM58DP-201ENST00000428076 619 ntBASIC17.07■□□□□ 0.32
MBD1Q9UIS9 AL592309.1-201ENST00000443127 649 ntBASIC17.07■□□□□ 0.32
MBD1Q9UIS9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 AC079140.1-201ENST00000508039 487 ntBASIC17.07■□□□□ 0.32
MBD1Q9UIS9 AC069262.1-201ENST00000539058 672 ntBASIC17.07■□□□□ 0.32
MBD1Q9UIS9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 AC080080.1-201ENST00000625121 2420 ntBASIC17.07■□□□□ 0.32
MBD1Q9UIS9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD1Q9UIS9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 TFAMP1-201ENST00000412727 736 ntBASIC17.06■□□□□ 0.32
MBD1Q9UIS9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 AC093214.1-201ENST00000511688 1107 ntBASIC17.06■□□□□ 0.32
MBD1Q9UIS9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 AC243562.1-201ENST00000560672 389 ntBASIC17.06■□□□□ 0.32
MBD1Q9UIS9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 AL645728.2-201ENST00000641974 660 ntBASIC17.06■□□□□ 0.32
MBD1Q9UIS9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MBD1Q9UIS9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 AC067863.1-201ENST00000494933 530 ntBASIC17.05■□□□□ 0.32
MBD1Q9UIS9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 AJ011932.1-201ENST00000621707 465 ntBASIC17.05■□□□□ 0.32
MBD1Q9UIS9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MBD1Q9UIS9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.04■□□□□ 0.32
MBD1Q9UIS9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms