Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 AC109322.1-201ENST00000524499 1264 ntBASIC17.34■□□□□ 0.37
EBF1Q9UH73 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 LINC00628-201ENST00000628516 1289 ntBASIC17.34■□□□□ 0.37
EBF1Q9UH73 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.33■□□□□ 0.37
EBF1Q9UH73 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
EBF1Q9UH73 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EBF1Q9UH73 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EBF1Q9UH73 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.33■□□□□ 0.37
EBF1Q9UH73 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EBF1Q9UH73 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EBF1Q9UH73 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
EBF1Q9UH73 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
EBF1Q9UH73 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
EBF1Q9UH73 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EBF1Q9UH73 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
EBF1Q9UH73 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.33■□□□□ 0.36
EBF1Q9UH73 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EBF1Q9UH73 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EBF1Q9UH73 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
EBF1Q9UH73 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.33■□□□□ 0.36
EBF1Q9UH73 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.33■□□□□ 0.36
EBF1Q9UH73 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.33■□□□□ 0.36
EBF1Q9UH73 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
EBF1Q9UH73 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.33■□□□□ 0.36
EBF1Q9UH73 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EBF1Q9UH73 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EBF1Q9UH73 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EBF1Q9UH73 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.33■□□□□ 0.36
EBF1Q9UH73 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
EBF1Q9UH73 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EBF1Q9UH73 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EBF1Q9UH73 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
EBF1Q9UH73 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 AC006116.8-202ENST00000587620 1550 ntBASIC17.32■□□□□ 0.36
EBF1Q9UH73 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 AC002056.1-201ENST00000395613 760 ntBASIC17.32■□□□□ 0.36
EBF1Q9UH73 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 ADH5P3-201ENST00000433842 1137 ntBASIC17.32■□□□□ 0.36
EBF1Q9UH73 AL513480.1-201ENST00000451731 511 ntBASIC17.32■□□□□ 0.36
EBF1Q9UH73 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.32■□□□□ 0.36
EBF1Q9UH73 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 AC239800.4-201ENST00000603712 296 ntBASIC17.32■□□□□ 0.36
EBF1Q9UH73 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 ACTL9-202ENST00000612068 1252 ntBASIC17.32■□□□□ 0.36
EBF1Q9UH73 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.32■□□□□ 0.36
EBF1Q9UH73 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
EBF1Q9UH73 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 REXO1L11P-201ENST00000620964 1927 ntBASIC17.31■□□□□ 0.36
EBF1Q9UH73 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 AD000864.1-201ENST00000624076 2295 ntBASIC17.31■□□□□ 0.36
EBF1Q9UH73 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
EBF1Q9UH73 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
EBF1Q9UH73 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms