Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NCDNQ9UBB6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.83■□□□□ 0.29
NCDNQ9UBB6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.83■□□□□ 0.29
NCDNQ9UBB6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NCDNQ9UBB6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
NCDNQ9UBB6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 MIR658-201ENST00000385210 100 ntBASIC16.83■□□□□ 0.28
NCDNQ9UBB6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.83■□□□□ 0.28
NCDNQ9UBB6 AC005332.8-201ENST00000622750 2735 ntBASIC16.83■□□□□ 0.28
NCDNQ9UBB6 PHGDH-209ENST00000641074 1780 ntBASIC16.83■□□□□ 0.28
NCDNQ9UBB6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NCDNQ9UBB6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 AC007541.1-201ENST00000570282 1469 ntBASIC16.82■□□□□ 0.28
NCDNQ9UBB6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 TSSK5P-201ENST00000423978 907 ntBASIC16.82■□□□□ 0.28
NCDNQ9UBB6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 NOC2LP1-202ENST00000452600 2235 ntBASIC16.82■□□□□ 0.28
NCDNQ9UBB6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
NCDNQ9UBB6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCDNQ9UBB6 ACA64.2-201ENST00000459014 129 ntBASIC16.81■□□□□ 0.28
NCDNQ9UBB6 AC092658.1-201ENST00000505836 891 ntBASIC16.81■□□□□ 0.28
NCDNQ9UBB6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 222.2 ms