Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC10Q9NYD6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 TREML5P-201ENST00000421694 576 ntBASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 TSPY16P-201ENST00000449843 468 ntBASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 AL138918.1-201ENST00000568306 659 ntBASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 AL158211.3-201ENST00000607385 239 ntBASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HOXC10Q9NYD6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 AC069120.2-201ENST00000524091 540 ntBASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 MIR6080-201ENST00000617359 66 ntBASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC10Q9NYD6 NOC2LP1-202ENST00000452600 2235 ntBASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC10Q9NYD6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 AL512638.1-201ENST00000457493 794 ntBASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 AC097493.3-201ENST00000509725 367 ntBASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC10Q9NYD6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms