Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SPHK1Q9NYA1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 AC025580.3-201ENST00000617932 1424 ntBASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 KRT19P2-202ENST00000557173 1012 ntBASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 AC023511.2-201ENST00000618803 211 ntBASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SPHK1Q9NYA1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 AL513480.1-201ENST00000451731 511 ntBASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 TOP3BP1-201ENST00000420768 1380 ntBASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.35■□□□□ 0.21
SPHK1Q9NYA1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 AC080080.1-201ENST00000625121 2420 ntBASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SPHK1Q9NYA1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms