Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 IGLL3P-201ENST00000412472 434 ntBASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 FAM185BP-201ENST00000443595 716 ntBASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 HCG4B-203ENST00000450128 991 ntBASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 AC078925.2-201ENST00000624013 1973 ntBASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 CRYGEP-201ENST00000412192 528 ntBASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 MPDU1-223ENST00000582151 728 ntBASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 ACTL9-202ENST00000612068 1252 ntBASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.68■□□□□ 0.9
ECHDC1Q9NTX5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 LINC00895-201ENST00000629028 1637 ntBASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 AP002490.2-201ENST00000524791 560 ntBASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 AC106730.1-201ENST00000566722 1090 ntBASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 AC009053.2-201ENST00000563701 2365 ntBASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 SLC22A20-204ENST00000530038 1673 ntBASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ECHDC1Q9NTX5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 PMS2P1-201ENST00000431037 1228 ntBASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 CXCL1P1-201ENST00000502804 216 ntBASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 AC091167.2-201ENST00000579581 588 ntBASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 AL391256.1-201ENST00000443260 1855 ntBASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ECHDC1Q9NTX5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms