Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 AL138918.1-201ENST00000568306 659 ntBASIC18.48■□□□□ 0.55
HIPK3Q9H422 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 AC018529.1-201ENST00000613063 361 ntBASIC18.48■□□□□ 0.55
HIPK3Q9H422 SPDYE12P-201ENST00000618416 771 ntBASIC18.48■□□□□ 0.55
HIPK3Q9H422 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.47■□□□□ 0.55
HIPK3Q9H422 AC090164.3-201ENST00000610780 2143 ntBASIC18.47■□□□□ 0.55
HIPK3Q9H422 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.47■□□□□ 0.55
HIPK3Q9H422 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.47■□□□□ 0.55
HIPK3Q9H422 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 AC003101.2-201ENST00000612557 442 ntBASIC18.47■□□□□ 0.55
HIPK3Q9H422 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIPK3Q9H422 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HIPK3Q9H422 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 TOP3BP1-201ENST00000420768 1380 ntBASIC18.46■□□□□ 0.55
HIPK3Q9H422 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 KRT17P7-201ENST00000451704 1104 ntBASIC18.46■□□□□ 0.55
HIPK3Q9H422 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 RARRES2P9-201ENST00000565168 469 ntBASIC18.46■□□□□ 0.55
HIPK3Q9H422 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 MIR6752-201ENST00000618442 71 ntBASIC18.46■□□□□ 0.55
HIPK3Q9H422 AP001350.2-201ENST00000625104 1094 ntBASIC18.46■□□□□ 0.55
HIPK3Q9H422 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.46■□□□□ 0.55
HIPK3Q9H422 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIPK3Q9H422 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.46■□□□□ 0.54
HIPK3Q9H422 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HIPK3Q9H422 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIPK3Q9H422 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms