Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 AP002472.1-201ENST00000577490 586 ntBASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 KRT18P28-201ENST00000453838 1332 ntBASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 AC093525.9-201ENST00000624961 1746 ntBASIC15.24■□□□□ 0.03
ZNF407Q9C0G0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 AC016396.2-201ENST00000562575 1417 ntBASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 AL121761.2-201ENST00000598007 1648 ntBASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 SLC22A20-204ENST00000530038 1673 ntBASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 AC069335.1-201ENST00000489972 472 ntBASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 SPCS2P1-201ENST00000561636 679 ntBASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 AC093520.2-201ENST00000561830 333 ntBASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.23■□□□□ 0.03
ZNF407Q9C0G0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 LINC00896-202ENST00000609602 2128 ntBASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF407Q9C0G0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF407Q9C0G0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms