Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 CD63-210ENST00000550776 870 ntTSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 DUX4L17-201ENST00000557360 1267 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC022145.2-201ENST00000598203 171 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC068137.2-201ENST00000605408 478 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC02084-201ENST00000606069 1096 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC092171.3-201ENST00000610122 2651 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC022211.2-201ENST00000585075 2527 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms