Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 UBALD1-205ENST00000590891 2641 ntBASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YIPF4Q9BSR8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 AC079776.2-201ENST00000641154 1609 ntBASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 EMBP1-201ENST00000458200 901 ntBASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF4Q9BSR8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 GPR89P-201ENST00000407924 1495 ntBASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 KRT18P31-201ENST00000506277 1292 ntBASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF4Q9BSR8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YIPF4Q9BSR8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms