Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.63■□□□□ 0.25
EBF4Q9BQW3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
EBF4Q9BQW3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
EBF4Q9BQW3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.62■□□□□ 0.25
EBF4Q9BQW3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 AL353593.2-201ENST00000602529 1483 ntBASIC16.62■□□□□ 0.25
EBF4Q9BQW3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 HBZP1-201ENST00000354915 429 ntBASIC16.62■□□□□ 0.25
EBF4Q9BQW3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 AL359075.1-203ENST00000462729 1002 ntBASIC16.62■□□□□ 0.25
EBF4Q9BQW3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 VENTXP5-201ENST00000523979 775 ntBASIC16.62■□□□□ 0.25
EBF4Q9BQW3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 AL031432.5-201ENST00000641059 760 ntBASIC16.62■□□□□ 0.25
EBF4Q9BQW3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.62■□□□□ 0.25
EBF4Q9BQW3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 DBET-201ENST00000630918 3363 ntBASIC16.61■□□□□ 0.25
EBF4Q9BQW3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 AC103564.2-201ENST00000432853 1299 ntBASIC16.61■□□□□ 0.25
EBF4Q9BQW3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 TUBB8P12-201ENST00000308911 1335 ntBASIC16.61■□□□□ 0.25
EBF4Q9BQW3 TUBB7P-202ENST00000428444 1305 ntBASIC16.61■□□□□ 0.25
EBF4Q9BQW3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 TUBB8P7-204ENST00000567960 1332 ntBASIC16.61■□□□□ 0.25
EBF4Q9BQW3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EBF4Q9BQW3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 AC092850.2-201ENST00000623821 2697 ntBASIC16.6■□□□□ 0.25
EBF4Q9BQW3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EBF4Q9BQW3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms