Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
NEK1Q96PY6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NEK1Q96PY6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NEK1Q96PY6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NEK1Q96PY6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 KRT8P49-201ENST00000604166 1432 ntBASIC20.14■□□□□ 0.81
NEK1Q96PY6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 FAAHP1-202ENST00000446499 1238 ntBASIC20.14■□□□□ 0.81
NEK1Q96PY6 AF186996.4-201ENST00000467186 377 ntBASIC20.14■□□□□ 0.81
NEK1Q96PY6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 AF228730.7-201ENST00000641842 219 ntBASIC20.14■□□□□ 0.81
NEK1Q96PY6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
NEK1Q96PY6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NEK1Q96PY6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 RPS15P9-201ENST00000494093 319 ntBASIC20.13■□□□□ 0.81
NEK1Q96PY6 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 AP002490.2-201ENST00000524791 560 ntBASIC20.13■□□□□ 0.81
NEK1Q96PY6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 AC012640.2-201ENST00000561606 901 ntBASIC20.13■□□□□ 0.81
NEK1Q96PY6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 AC008735.5-201ENST00000623544 497 ntBASIC20.13■□□□□ 0.81
NEK1Q96PY6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.13■□□□□ 0.81
NEK1Q96PY6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NEK1Q96PY6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEK1Q96PY6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.12■□□□□ 0.81
NEK1Q96PY6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
NEK1Q96PY6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEK1Q96PY6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.12■□□□□ 0.81
NEK1Q96PY6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NEK1Q96PY6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms