Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.94□□□□□ -0.34
AP1S3Q96PC3 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 BX088651.1-201ENST00000540551 451 ntBASIC12.94□□□□□ -0.34
AP1S3Q96PC3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
AP1S3Q96PC3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 PCDHA14-201ENST00000506751 2298 ntBASIC12.93□□□□□ -0.34
AP1S3Q96PC3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms