Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 AC010507.1-201ENST00000633895 436 ntBASIC17.53■□□□□ 0.4
RPRD1AQ96P16 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPRD1AQ96P16 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPRD1AQ96P16 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPRD1AQ96P16 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.52■□□□□ 0.39
RPRD1AQ96P16 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RPRD1AQ96P16 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
RPRD1AQ96P16 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RPRD1AQ96P16 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.52■□□□□ 0.39
RPRD1AQ96P16 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.51■□□□□ 0.39
RPRD1AQ96P16 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 PGAM5P1-201ENST00000518923 814 ntBASIC17.51■□□□□ 0.39
RPRD1AQ96P16 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 AC107918.2-201ENST00000530817 355 ntBASIC17.51■□□□□ 0.39
RPRD1AQ96P16 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 AC096734.2-201ENST00000562054 433 ntBASIC17.51■□□□□ 0.39
RPRD1AQ96P16 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 AC012313.1-201ENST00000593393 3059 ntBASIC17.51■□□□□ 0.39
RPRD1AQ96P16 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
RPRD1AQ96P16 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 AC092068.3-201ENST00000587894 2016 ntBASIC17.5■□□□□ 0.39
RPRD1AQ96P16 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 FAM185BP-201ENST00000443595 716 ntBASIC17.5■□□□□ 0.39
RPRD1AQ96P16 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.5■□□□□ 0.39
RPRD1AQ96P16 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms