Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 AC003101.2-201ENST00000612557 442 ntBASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 AL138828.2-201ENST00000615812 383 ntBASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 AC142381.1-201ENST00000426099 345 ntBASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 GPR53P-205ENST00000457298 1084 ntBASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN4Q96NY8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 ARSEP1-201ENST00000420443 635 ntBASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 AL035456.1-201ENST00000456064 1369 ntBASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN4Q96NY8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.48■□□□□ 0.39
NECTIN4Q96NY8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.48■□□□□ 0.39
NECTIN4Q96NY8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN4Q96NY8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.48■□□□□ 0.39
NECTIN4Q96NY8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.48■□□□□ 0.39
NECTIN4Q96NY8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.48■□□□□ 0.39
NECTIN4Q96NY8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms