Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 BTBD7P1-201ENST00000447253 1453 ntBASIC19.68■□□□□ 0.74
CDCA5Q96FF9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 ZNF890P-202ENST00000530367 1156 ntBASIC19.68■□□□□ 0.74
CDCA5Q96FF9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 AL079307.3-201ENST00000556114 283 ntBASIC19.68■□□□□ 0.74
CDCA5Q96FF9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 RNF165-205ENST00000588679 2904 ntBASIC19.68■□□□□ 0.74
CDCA5Q96FF9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 AC022210.1-201ENST00000449856 793 ntBASIC19.67■□□□□ 0.74
CDCA5Q96FF9 DOC2GP-202ENST00000514950 1163 ntBASIC19.67■□□□□ 0.74
CDCA5Q96FF9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 SPTSSB-204ENST00000617024 1292 ntBASIC19.67■□□□□ 0.74
CDCA5Q96FF9 AC007431.3-201ENST00000623221 587 ntBASIC19.67■□□□□ 0.74
CDCA5Q96FF9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.67■□□□□ 0.74
CDCA5Q96FF9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 AC093004.1-201ENST00000508850 424 ntBASIC19.66■□□□□ 0.74
CDCA5Q96FF9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 MIR4492-201ENST00000581627 80 ntBASIC19.66■□□□□ 0.74
CDCA5Q96FF9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 AC090164.3-201ENST00000610780 2143 ntBASIC19.66■□□□□ 0.74
CDCA5Q96FF9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.66■□□□□ 0.74
CDCA5Q96FF9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.65■□□□□ 0.74
CDCA5Q96FF9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms