Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RNF183Q96D59 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RNF183Q96D59 RNA5SP415-201ENST00000517246 115 ntBASIC12.69□□□□□ -0.38
RNF183Q96D59 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF183Q96D59 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF183Q96D59 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RNF183Q96D59 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.69□□□□□ -0.38
RNF183Q96D59 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF183Q96D59 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.69□□□□□ -0.38
RNF183Q96D59 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.69□□□□□ -0.38
RNF183Q96D59 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.69□□□□□ -0.38
RNF183Q96D59 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 TERC-201ENST00000602385 541 ntBASIC12.69□□□□□ -0.38
RNF183Q96D59 Z83851.2-201ENST00000609564 659 ntBASIC12.69□□□□□ -0.38
RNF183Q96D59 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.69□□□□□ -0.38
RNF183Q96D59 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
RNF183Q96D59 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RNF183Q96D59 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RNF183Q96D59 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF183Q96D59 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 AC009336.1-201ENST00000608941 1553 ntBASIC12.69□□□□□ -0.38
RNF183Q96D59 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF183Q96D59 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RNF183Q96D59 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RNF183Q96D59 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.68□□□□□ -0.38
RNF183Q96D59 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.68□□□□□ -0.38
RNF183Q96D59 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RNF183Q96D59 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.68□□□□□ -0.38
RNF183Q96D59 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.68□□□□□ -0.38
RNF183Q96D59 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.68□□□□□ -0.38
RNF183Q96D59 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 AC136632.2-201ENST00000512891 861 ntBASIC12.68□□□□□ -0.38
RNF183Q96D59 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 UNC93B6-202ENST00000528242 690 ntBASIC12.68□□□□□ -0.38
RNF183Q96D59 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
RNF183Q96D59 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RNF183Q96D59 AC027601.4-201ENST00000611259 610 ntBASIC12.68□□□□□ -0.38
RNF183Q96D59 AC004706.3-202ENST00000621574 984 ntBASIC12.68□□□□□ -0.38
RNF183Q96D59 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.68□□□□□ -0.38
RNF183Q96D59 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 AC148477.5-201ENST00000625164 1645 ntBASIC12.68□□□□□ -0.38
RNF183Q96D59 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
RNF183Q96D59 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RNF183Q96D59 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RNF183Q96D59 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.68□□□□□ -0.38
RNF183Q96D59 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RNF183Q96D59 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms