Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 BNIP3P18-201ENST00000593976 575 ntBASIC19.23■□□□□ 0.67
SMARCE1Q969G3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 NSUN5P1-202ENST00000421140 1535 ntBASIC19.23■□□□□ 0.67
SMARCE1Q969G3 NSUN5P2-203ENST00000457352 1529 ntBASIC19.23■□□□□ 0.67
SMARCE1Q969G3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMARCE1Q969G3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 RCN1P2-201ENST00000398357 915 ntBASIC19.22■□□□□ 0.67
SMARCE1Q969G3 PCED1CP-201ENST00000419887 785 ntBASIC19.22■□□□□ 0.67
SMARCE1Q969G3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 AP002414.4-201ENST00000589764 1148 ntBASIC19.22■□□□□ 0.67
SMARCE1Q969G3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 PMPCAP1-201ENST00000508114 1576 ntBASIC19.22■□□□□ 0.67
SMARCE1Q969G3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCE1Q969G3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 LINC00265-3P-201ENST00000447588 903 ntBASIC19.21■□□□□ 0.67
SMARCE1Q969G3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCE1Q969G3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCE1Q969G3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms