Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
BRF1Q92994 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRF1Q92994 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.03■□□□□ 0.8
BRF1Q92994 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.03■□□□□ 0.8
BRF1Q92994 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.03■□□□□ 0.8
BRF1Q92994 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRF1Q92994 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.03■□□□□ 0.8
BRF1Q92994 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRF1Q92994 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.03■□□□□ 0.8
BRF1Q92994 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.03■□□□□ 0.8
BRF1Q92994 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRF1Q92994 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRF1Q92994 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRF1Q92994 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRF1Q92994 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRF1Q92994 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRF1Q92994 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.02■□□□□ 0.8
BRF1Q92994 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.02■□□□□ 0.8
BRF1Q92994 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.02■□□□□ 0.8
BRF1Q92994 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.02■□□□□ 0.8
BRF1Q92994 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.02■□□□□ 0.8
BRF1Q92994 KRT18P27-201ENST00000427733 1299 ntBASIC20.02■□□□□ 0.8
BRF1Q92994 PAWRP1-201ENST00000451083 565 ntBASIC20.02■□□□□ 0.8
BRF1Q92994 KRT126P-201ENST00000549467 1181 ntBASIC20.02■□□□□ 0.8
BRF1Q92994 AC006557.2-201ENST00000592985 1240 ntBASIC20.02■□□□□ 0.8
BRF1Q92994 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
BRF1Q92994 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.02■□□□□ 0.8
BRF1Q92994 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.02■□□□□ 0.8
BRF1Q92994 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.02■□□□□ 0.8
BRF1Q92994 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.02■□□□□ 0.8
BRF1Q92994 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRF1Q92994 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.02■□□□□ 0.79
BRF1Q92994 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
BRF1Q92994 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
BRF1Q92994 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.02■□□□□ 0.79
BRF1Q92994 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BRF1Q92994 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BRF1Q92994 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
BRF1Q92994 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
BRF1Q92994 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
BRF1Q92994 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
BRF1Q92994 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 AC073621.1-201ENST00000392730 636 ntBASIC20.01■□□□□ 0.79
BRF1Q92994 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.01■□□□□ 0.79
BRF1Q92994 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.01■□□□□ 0.79
BRF1Q92994 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.01■□□□□ 0.79
BRF1Q92994 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.01■□□□□ 0.79
BRF1Q92994 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
BRF1Q92994 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
BRF1Q92994 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.01■□□□□ 0.79
BRF1Q92994 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
BRF1Q92994 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
BRF1Q92994 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BRF1Q92994 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.01■□□□□ 0.79
BRF1Q92994 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BRF1Q92994 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20■□□□□ 0.79
BRF1Q92994 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
BRF1Q92994 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20■□□□□ 0.79
BRF1Q92994 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
BRF1Q92994 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20■□□□□ 0.79
BRF1Q92994 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms